Uncultivated Chryseobacterium indologenes UBA900 g... - BioSample

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Result Filters

Identifiers: BioSample: SAMN06453945; Sample name: Chryseobacterium indologenes UBA900; SRA: SRS2038995

Organism: Chryseobacterium gleum
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group; Chryseobacterium

Attributes

isolation source	wood
geographic location	USA:New York City
collection date	not applicable
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822543 metagenome
isolate	UBA900
metagenome source	terrestrial metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	100.00%
contamination_estimated	0.00%
environmental_sample	true
genome_coverage	43.35
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749160.
note	Originally submitted as Chryseobacterium indologenes but changed in October 2018 because of ANI results to Chryseobacterium gleum