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MAG: Planctomycetaceae 2022-09-12 WE12

Identifiers
BioSample: SAMN45875049; Sample name: Planctomycetaceae samp_4377_concoct_348
Organism
Planctomycetaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; Planctomycetales; Planctomycetaceae; unclassified Planctomycetaceae
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature22.7 °C
conductivity248.7 μS/cm
turbidity8.43 NTU
chlorophyll30.42 μg/L
soluble reactive phosphorus4.24 μg/L
particulate organic nitrogen0.29 mg/L
particulate organic carbon1.69 mg/L
suspended particulate matter9.83 mg/L
wind speed13.61 knots
collection date2022-09-12T15:00:00Z
depth0.75 m
broad-scale environmental contextlarge freshwater lake biome [ENVO:00000891]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.7026 N 83.2585 W
isolatesamp_4377_concoct_348
isolation sourcelake water
derived fromSAMN45060278
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
dissolved oxygen6.99 mg/L
GAZ_idGAZ:00003931
NOAA_SiteWE12
keywordsHABs
depth_at_sampling_location6.57 m
secchi1 m
part_microcyst0.15 μg/L
diss_microcyst0.24 μg/L
ext_phyco9.85 μg/L
tot_phos48.58 μg/L
diss_phosp15.26 μg/L
ammonia5.31 μg/L
suspend_vol_solid3.77 mg/L
par388.4 μE/m2/s
skyovercast
Notes8761-SRC-48
nitrate_nitrite0.006 mg/L
col_dom0.73 µg/L
SampleIDsamp_4377
Completeness (%)95.98
Contamination (%)1.15
Strain heterogeneity (%)50
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45875049
ID:
45875049

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