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MAG: Sphingomonadales 2020-09-01 WE8

Identifiers
BioSample: SAMN45874880; Sample name: Sphingomonadales samp_2157_semibin_25
Organism
Sphingomonadales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; unclassified Sphingomonadales
Package
MIMAG: metagenome-assembled genome, water; version 6.0
Attributes
size-fraction upper threshold3 μm
temperature24.3 °C
conductivity255.2 μS/cm
turbidity9.49 NTU
chlorophyll18.85 μg/L
soluble reactive phosphorus5.19 μg/L
particulate organic nitrogen0.37 mg/L
particulate organic carbon2.02 mg/L
suspended particulate matter9.1 mg/L
wind speed7.97 knots
collection date2020-09-01T12:03:00Z
depth1 m
broad-scale environmental contextEutrophic Lake [ENVO:01000548]
local-scale environmental contextLake [ENVO:00000020]
environmental mediumwater [ENVO:00002006]
geographic locationUSA: Lake Erie
latitude and longitude41.8331 N 83.3606 W
isolatesamp_2157_semibin_25
isolation sourcelake water
derived fromSAMN45060229
sample typemetagenomic assembly
metagenome sourcefreshwater metagenome
dissolved oxygen7.47 mg/L
GAZ_idGAZ:00003931
NOAA_SiteWE8
keywordsHABs
depth_at_sampling_location5.18 m
secchi1 m
part_microcyst0.19 μg/L
diss_microcyst0.17 μg/L
ext_phyco43.75 μg/L
tot_phos36.74 μg/L
diss_phosp5.91 μg/L
ammonia7.04 μg/L
suspend_vol_solid4.92 mg/L
skysunny
wave_height0.66 ft
Notes7222-SRC-123
nitrate_nitrite0.002 mg/L
col_dom0.73 µg/L
SampleIDsamp_2157
Completeness (%)96.84
Contamination (%)4.38
Strain heterogeneity (%)0
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1190886
Retrieve all samples from this project

Submission
University of Michigan, Paul Den Uyl; 2024-12-17
Accession:
SAMN45874880
ID:
45874880

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