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MIMAG Metagenome-assembled Genome sample from Treponema sp.

Identifiers
BioSample: SAMN37894567; Sample name: SGB_8084
Organism
Treponema sp.
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; unclassified Treponema
Package
MIMAG: metagenome-assembled genome, host-associated; version 6.0
Attributes
isolateT1900045635_YK20190329.MAGScoT_cleanbin_000011
collection date2019-09-23
broad-scale environmental contextDigestive tract enviroment
local-scale environmental contextIntestinal
environmental mediumfecal material
geographic locationChina: Shigatse
isolation sourcehigh altitude fresh fecal sample
latitude and longitude30.26 N 82.93 E
host common nameTibetan Yak
hostTibetan Yak
relationship to oxygenanaerobe
sample collection device or methodFresh fecal
sample material processingfreeze
sample size5ml
derived fromSAMN34727946
sample typemetagenomic assembly
metagenome sourcegut metagenome
BioSamples_containing_similar_MAGsSAMN34727588, SAMN34727588, SAMN34727590, SAMN34727590, SAMN34727605, SAMN34727605, SAMN34727607, SAMN34727607, SAMN34727257, SAMN34727257, SAMN34727131, SAMN34727131, SAMN34727156, SAMN34727156, SAMN34727071, SAMN34727168, SAMN34727168, SAMN34727995, SAMN34727995, SAMN34727932, SAMN34727932, SAMN34727931, SAMN34727931, SAMN34727994, SAMN34727994, SAMN34727992, SAMN34727761, SAMN34727761, SAMN34727993, SAMN34727993, SAMN34727926, SAMN34727926, SAMN34727843, SAMN34727843, SAMN34727727, SAMN34727727, SAMN34727719, SAMN34727719, SAMN34728072, SAMN34727857, SAMN34727940, SAMN34727940, SAMN34727785, SAMN34727785, SAMN34727757, SAMN34727757, SAMN34727941, SAMN34727941, SAMN34727775, SAMN34727775, SAMN34727781, SAMN34727781, SAMN34727898, SAMN34727898, SAMN34727916, SAMN34727916, SAMN34727819, SAMN34727819, SAMN34727958, SAMN34727801, SAMN34727801, SAMN34727789, SAMN34727789, SAMN34727946, SAMN34727946, SAMN34727810, SAMN34727810, SAMN34727814, SAMN34727814, SAMN34727975, SAMN34727720, SAMN34727720, SAMN34727978, SAMN34727978, SAMN34727986, SAMN34727986, SAMN34727998, SAMN34727998, SAMN34728014, SAMN34728014, SAMN34728036, SAMN34728036, SAMN34728001, SAMN34728001, SAMN34728006, SAMN34728006, SAMN34728039, SAMN34728039, SAMN34728084, SAMN34728084, SAMN34728040, SAMN34727721
metagenomic1
environmental-sample1
Description

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA1030165
Retrieve all samples from this project

Submission
University of Chinese Academy of Sciences, Shi Xingwei; 2023-10-20
Accession:
SAMN37894567
ID:
37894567

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