U_75043

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN13192971; Sample name: UBA11423 genome recovered from SRX327522; SRA: SRS5771360

Organism: Methanolinea sp.
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanolinea; unclassified Methanolinea

Attributes

isolate	UBA11423
collection date	2012-04-17
broad-scale environmental context	produced water sample
local-scale environmental context	not available
environmental medium	not available
geographic location	Canada: Medicine Hat, Alberta
isolation source	hydrocarbon
latitude and longitude	57.02 N 111.55 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318
metagenome source	hydrocarbon metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.7274
contamination_estimated	0.0065
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6