Microbe sample from Alphaproteobacteria bacterium - BioSample - NCBI

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Microbe sample from Alphaproteobacteria bacterium

Identifiers: BioSample: SAMN10967492; Sample name: Uncultivated Alphaproteobacteria bacterium UWMA-0145 genome recovered from SRR2046221-2 and SRR2046235-8; SRA: SRS4404772

Organism: Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria

Package: Microbe; version 1.0

Attributes

isolate	UWMA-0145
isolation source	Dilute Hydrothermal Plume
collection date	2012-01-18
geographic location	Atlantic Ocean:Mid Cayman Rise
sample type	metagenomic assembly
latitude and longitude	18.37636666 N 81.79808333 W
derived from	Metagenome-assembled genome binned from sequencing reads available in SRR2046235 SRR2046236 SRR2046222 SRR2046238 SRR2046237 SRR2046221
metagenome source	marine metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	69.43
contamination_estimated	8.37
quality_assessment_method_and_version	CheckM v1.0.11
environmental-sample	true
genome_coverage	12.29
mapping_method_and_version	Bowtie 2 v2.3.4.1
metagenomic	true

BioProject: PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19

Accession:: SAMN10967492
ID:: 10967492

BioProject SRA Nucleotide

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