Microbe sample from Candidatus Pelagibacter sp. - BioSample - NCBI

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Microbe sample from Candidatus Pelagibacter sp.

Identifiers: BioSample: SAMN10967471; Sample name: Uncultivated Pelagibacter sp. UWMA-0123 genome recovered from SRR1217462; SRA: SRS4404852

Organism: Candidatus Pelagibacter sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Candidatus Pelagibacterales; Candidatus Pelagibacteraceae; Candidatus Pelagibacter; unclassified Candidatus Pelagibacter

Package: Microbe; version 1.0

Attributes

isolate	UWMA-0123
isolation source	Tui Malila hydrothermal plume 10m
collection date	2009-07-01
geographic location	Pacific Ocean:Lau Basin
sample type	metagenomic assembly
latitude and longitude	21.99001968 S 176.56874418 W
derived from	Metagenome-assembled genome binned from sequencing reads available in SRR1217462
metagenome source	marine metagenome
assembly_method_and_version	SPAdes v3.12.0
completeness_estimated	68.35
contamination_estimated	2.41
quality_assessment_method_and_version	CheckM v1.0.11
environmental-sample	true
genome_coverage	30.43
mapping_method_and_version	Bowtie 2 v2.3.4.1
metagenomic	true

BioProject: PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19

Accession:: SAMN10967471
ID:: 10967471

BioProject SRA Nucleotide

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