Microbe sample from Alphaproteobacteria bacterium - BioSample - NCBI

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Microbe sample from Alphaproteobacteria bacterium

Identifiers: BioSample: SAMN10967427; Sample name: Uncultivated Alphaproteobacteria bacterium UWMA-0076 genome recovered from SRR1217452 SRR1217567; SRA: SRS4405072

Organism: Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria

Package: Microbe; version 1.0

Attributes

isolate	UWMA-0076
isolation source	Mariner hydrothermal plume 25m
collection date	2009-06-20
geographic location	Pacific Ocean:Lau Basin
sample type	metagenomic assembly
latitude and longitude	22.18030488 S 176.60144038 W
derived from	Metagenome-assembled genome binned from sequencing reads available in SRR1217452 SRR1217567
metagenome source	marine metagenome
assembly_method_and_version	SPAdes v3.12.0
completeness_estimated	83.81
contamination_estimated	0.85
quality_assessment_method_and_version	CheckM v1.0.11
environmental-sample	true
genome_coverage	13.59
mapping_method_and_version	Bowtie 2 v2.3.4.1
metagenomic	true

BioProject: PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19

Accession:: SAMN10967427
ID:: 10967427

BioProject SRA Nucleotide

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