Microbe sample from Nitrospinaceae bacterium - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Microbe sample from Nitrospinaceae bacterium

Identifiers: BioSample: SAMN10967387; Sample name: Uncultivated Nitrospinaceae bacterium UWMA-0035 genome recovered from SRR1217367,459,564 and 566; SRA: SRS4404907

Organism: Nitrospinaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Nitrospinota/Tectimicrobiota group; Nitrospinota; Nitrospinia; Nitrospinales; Nitrospinaceae; unclassified Nitrospinaceae

Package: Microbe; version 1.0

Attributes

isolate	UWMA-0035
isolation source	Kilo Moana Hydrothermal plume 60m
collection date	2009-06-15
geographic location	Pacific Ocean:Lau Basin
sample type	metagenomic assembly
latitude and longitude	20.05382503 S 176.13358938 W
derived from	Metagenome-assembled genome binned from sequencing reads available in SRR1217367 SRR1217459 SRR1217564 SRR1217566
metagenome source	marine metagenome
assembly_method_and_version	SPAdes v3.12.0
completeness_estimated	65.39
contamination_estimated	8.55
quality_assessment_method_and_version	CheckM v1.0.11
environmental-sample	true
genome_coverage	18.6
mapping_method_and_version	Bowtie 2 v2.3.4.1
metagenomic	true

BioProject: PRJNA522654 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: University of Wisconsin-Madison, Zhichao Zhou; 2019-02-19

Accession:: SAMN10967387
ID:: 10967387

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Microbe sample from Nitrospinaceae bacterium
Microbe sample from Nitrospinaceae bacterium

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample