Microbe sample from Crocinitomix sp. - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Microbe sample from Crocinitomix sp.

Identifiers: BioSample: SAMN09926471; Sample name: Uncultivated Crocinitomix sp. SZUA-1404 genome recovered from ERS1370020; SRA: SRS3745384

Organism: Crocinitomix sp.
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Crocinitomicaceae; Crocinitomix; unclassified Crocinitomix

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1404
isolation source	Mid-Cayman Rise Vent Fluids
collection date	2017-04-15
geographic location	Atlantic Ocean:Mid Cayman Rise
sample type	metagenomic assembly
latitude and longitude	18.5466 N 81.7182 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370020
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	94.59
contamination_estimated	3.24
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	26.99
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926471
ID:: 9926471

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Microbe sample from Crocinitomix sp.
Microbe sample from Crocinitomix sp.

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample