Microbe sample from Chromatiales bacterium - BioSample - NCBI

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Microbe sample from Chromatiales bacterium

Identifiers: BioSample: SAMN09926422; Sample name: Uncultivated Chromatiales bacterium SZUA-1292 genome recovered from SRR1217460 SRR1217463 SRR1217565; SRA: SRS3745362

Organism: Chromatiales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Chromatiales; unclassified Chromatiales

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1292
isolation source	Abe hydrothermal plume 200m
collection date	2009-05-25
geographic location	Pacific Ocean:Lau Basin
sample type	metagenomic assembly
latitude and longitude	20.76121471 S 176.19057363 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217460 SRR1217463 SRR1217565
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	88.48
contamination_estimated	1.93
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	25.62
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926422
ID:: 9926422

BioProject SRA Nucleotide

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