Microbe sample from Gemmatimonadota bacterium - BioSample - NCBI

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Microbe sample from Gemmatimonadota bacterium

Identifiers: BioSample: SAMN09926374; Sample name: Uncultivated Gemmatimonadetes bacterium SZUA-1190 genome recovered from SRR2046238 SRR2046237 SRR2046221; SRA: SRS3745266

Organism: Gemmatimonadota bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Gemmatimonadota; unclassified Gemmatimonadota

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1190
isolation source	Hydrothermal Plume
collection date	2012-01-21
geographic location	Atlantic Ocean:Mid Cayman Rise
sample type	metagenomic assembly
latitude and longitude	18.54650166 N 81.71823333 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR2046238 SRR2046237 SRR2046221
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	95.36
contamination_estimated	3.3
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	38.87
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926374
ID:: 9926374

BioProject SRA Nucleotide

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