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Microbe sample from Dehalococcoidia bacterium

Identifiers
BioSample: SAMN09926263; Sample name: Uncultivated Dehalococcoidia bacterium SZUA-1024 genome recovered from SRR3577362; SRA: SRS3745197
Organism
Dehalococcoidia bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
isolateSZUA-1024
isolation sourceGuaymas Basin Hydrothermal plume metagenome
collection date2004-07-11
geographic locationUSA:Guaymas Basin
sample typemetagenomic assembly
latitude and longitude27.51583333 N 111.425 W
derived fromThis BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR3577362
metagenome sourcehydrothermal vent metagenome
assembly_method_and_versionMEGAHIT v1.1.2
completeness_estimated94.72
contamination_estimated1.98
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage11.3
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-08-28
Accession:
SAMN09926263
ID:
9926263

BioProject SRA Nucleotide

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