Microbe sample from Thermoplasmata archaeon - BioSample - NCBI

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Microbe sample from Thermoplasmata archaeon

Identifiers: BioSample: SAMN09638599; Sample name: Uncultivated Thermoplasmata archaeon HyVt-403 genome recovered from SRR3669912 and SRR3679449; SRA: SRS3740907

Organism: Thermoplasmata archaeon
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; unclassified Thermoplasmata

Package: Microbe; version 1.0

Attributes

isolate	HyVt-403
isolation source	hydrothermal sediments
collection date	2009-12
geographic location	Mexico: Guaymas Basin, Gulf of California
sample type	metagenomic assembly
latitude and longitude	27.100437 N 111.124548 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR3669912 and SRR3679449
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	65.19
contamination_estimated	5.61
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	7.42
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638599
ID:: 9638599

BioProject SRA Nucleotide

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