Uncultivated Escherichia coli genome recovered fro... - BioSample - NCBI

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Uncultivated Escherichia coli genome recovered from SRX1159966

Identifiers: BioSample: SAMN08019488; Sample name: UBA8123; SRA: SRS2846364

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Microbe; version 1.0

Attributes

isolate	UBA8123
isolation source	food
collection date	not applicable
geographic location	not applicable
sample type	metagenomic assembly
metagenome source	food metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
genome_coverage	7.24x
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
completeness_estimated	70.94%
contamination_estimated	1.51%
environmental_sample	true
metagenomic	true
note	food metagenome
value	This BioSample is a metagenomic assembly obtained from the food metagenome reads: SRR2177250.

Description: Uncultivated genome recovered from an assembly of the SRX1159966 metagenome.

BioProject: PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-11-13

Accession:: SAMN08019488
ID:: 8019488

BioProject SRA Nucleotide

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