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Uncultivated Porphyromonadaceae bacterium UBA8128 genome recovered from SRX255562

Identifiers
BioSample: SAMN08019486; Sample name: UBA8128; SRA: SRS2845440
Organism
Porphyromonadaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
isolateUBA8128
isolation sourcetermite gut
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcetermite gut metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage16.61x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated78.70%
contamination_estimated2.14%
environmental_sampletrue
metagenomictrue
notetermite gut metagenome
valueThis BioSample is a metagenomic assembly obtained from the termite gut metagenome reads: SRR797686,SRR797683.
Description

Uncultivated genome recovered from an assembly of the SRX255562 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08019486
ID:
8019486

BioProject SRA Nucleotide

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