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Uncultivated Alphaproteobacteria bacterium UBA12229 genome recovered from SRX806421

Identifiers
BioSample: SAMN08017673; Sample name: UBA12229; SRA: SRS2847169
Organism
Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
isolateUBA12229
isolation sourcesediment
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourcesediment metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage14.76x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated80.23%
contamination_estimated0.91%
environmental_sampletrue
metagenomictrue
notesediment metagenome
valueThis BioSample is a metagenomic assembly obtained from the sediment metagenome reads: SRR1706184.
Description

Uncultivated genome recovered from an assembly of the SRX806421 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017673
ID:
8017673

BioProject SRA Nucleotide

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