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Uncultivated Shewanella bacterium UBA12176 genome recovered from SRX1134172

Identifiers
BioSample: SAMN08017605; Sample name: UBA12176; SRA: SRS2847633
Organism
Shewanella sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; unclassified Shewanella
Package
Microbe; version 1.0
Attributes
isolateUBA12176
isolation sourceoil production facility
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourceoil production facility metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage34.42x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated93.50%
contamination_estimated0.54%
environmental_sampletrue
metagenomictrue
noteoil production facility metagenome
valueThis BioSample is a metagenomic assembly obtained from the oil production facility metagenome reads: SRR2147303,SRR2147316,SRR2147318.
Description

Uncultivated genome recovered from an assembly of the SRX1134172 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017605
ID:
8017605

BioProject SRA Nucleotide

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