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Pathogen: clinical or host-associated sample from Shigella flexneri

Identifiers
BioSample: SAMN07974675; Sample name: DMB SH20107; SRA: SRS2989894
Organism
Shigella flexneri
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
isolation sourcefeces
Interagency Food Safety Analytics Collaboration (IFSAC) categoryclinical/research| human
source typehuman
collected byCenters for Disease Control and Prevention| Enteric Diseases Laboratory Branch
hostHomo sapiens
collection date1989-02-15
geographic locationUSA
latitude and longitude39.04 N 76.64 W
host diseaseShigellosis
strainDMB SH20107
serotypeSF6:H45
isolate name aliasShigella flexneri 796-83
food product origin geographic locationUSA:MD
project nameGenomeTrakr
sequenced byUnited States Food and Drug Administration| Center for Food Safety and Applied Nutrition
attribute_packageclinical/host-associated
ontological termfeces:uberon_0001988
groupShigella 1
BioProject
PRJNA273284 Shigella
Retrieve all samples from this project

Submission
CFSAN; 2017-11-03
Accession:
SAMN07974675
ID:
7974675

BioProject SRA Nucleotide

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