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Metagenomes from NICU surfaces and sink samples

Identifiers
BioSample: SAMN07426578; Sample name: S2_012_000_R1_abawaca.30sta_S2_012_000_R1
Organism
Cutibacterium granulosum
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Cutibacterium
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
isolation sourcehospital NICU surfaces and sink samples
collection date2014
geographic locationUSA: Pittsburgh, Pennsylvania Magee Womens Hospital
latitude and longitude40.43682860 N 79.96068800 W
absolute air humiditymissing
air temperature23.9
building occupancy typehealth care
building settingurban
carbon dioxide477
broad-scale environmental contexthospital
local-scale environmental contexthospital
environmental mediumhospital
filter typeHEPA
heating and cooling system typeforced air system
indoor spacenot applicable
light typeelectric light
occupancy at sampling1
occupant density at sampling1person/(4.6*2.9*2.4 meters)
organism countmissing
relative air humidity41
space typical statetypical occupied
typical occupant densitynormal
ventilation typeHVAC
isolateS2_012_000_R1_78
strainmissing
isolation and growth conditionmissing
reference for biomaterialmissing
number of repliconsmissing
metagenome sourceindoor metagenome
sample typemetagenomic assembly
environmental-sample1
metagenomic1
noteThis biosample is a metagenomic assembly obtained form the indoor metagenome sample: SAMN06443389
noteOriginally submitted as Acidipropionibacterium acidipropionici but changed in October 2018 because of ANI results to Cutibacterium granulosum
Description

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA376580 indoor metagenome
Retrieve all samples from this project

Submission
Jill Banfield's Lab at Berkeley; 2017-07-30
Accession:
SAMN07426578
ID:
7426578

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