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Uncultivated Treponema sp. UBA7570 genome recovered from SRX834648

Identifiers
BioSample: SAMN06457889; Sample name: Treponema sp. UBA7570; SRA: SRS2035231
Organism
Treponema sp. UBA7570
cellular organisms; Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; unclassified Treponema
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA7570
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834648 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.36%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage43.87
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747047.
Description

Uncultivated genome recovered from an assembly of the SRX834648 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457889
ID:
6457889

BioProject SRA Nucleotide

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