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Uncultivated Porphyromonadaceae bacterium UBA3258 genome recovered from SRX803751

Identifiers
BioSample: SAMN06457870; Sample name: Porphyromonadaceae bacterium UBA3258; SRA: SRS2036484
Organism
Porphyromonadaceae bacterium UBA3258
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3258
isolation sourcerat gut
metagenome sourcerat gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX803751 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.31%
contamination_estimated0.88%
environmental_sampletrue
genome_coverage257.99
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702553.
Description

Uncultivated genome recovered from an assembly of the SRX803751 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457870
ID:
6457870

BioProject SRA Nucleotide

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