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Uncultivated Nocardioidaceae bacterium UBA4001 genome recovered from SRX546000

Identifiers
BioSample: SAMN06457829; Sample name: Nocardioidaceae bacterium UBA4001; SRA: SRS2034172
Organism
Nocardioidaceae bacterium UBA4001
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Propionibacteriales; Nocardioidaceae; unclassified Nocardioidaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada:Fort McMurray
isolateUBA4001
isolation sourceSand Stone
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX546000 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.91%
contamination_estimated4.15%
environmental_sampletrue
genome_coverage354.18
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313239,SRR1313240.
Description

Uncultivated genome recovered from an assembly of the SRX546000 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457829
ID:
6457829

BioProject SRA Nucleotide

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