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Uncultivated Marinobacter hydrocarbonoclasticus UBA1145 genome recovered from SRX1075082

Identifiers
BioSample: SAMN06457799; Sample name: Marinobacter hydrocarbonoclasticus UBA1145; SRA: SRS2032138
Organism
Marinobacter nauticus
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Marinobacteraceae; Marinobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean:Mid Cayman Rise
isolateUBA1145
isolation sourceBeebe hydrothermal vent plume at at depth of 4900m
metagenome sourcehydrothermal vent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1075082 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.08%
contamination_estimated1.80%
environmental_sampletrue
genome_coverage14.19
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2080393.
Description

Uncultivated genome recovered from an assembly of the SRX1075082 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457799
ID:
6457799

BioProject SRA Nucleotide

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