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Uncultivated Ruminococcus sp. UBA3270 genome recovered from SRX803751

Identifiers
BioSample: SAMN06457625; Sample name: Ruminococcus sp. UBA3270; SRA: SRS2036469
Organism
Ruminococcus sp. UBA3270
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; Ruminococcus; unclassified Ruminococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3270
isolation sourcerat gut
metagenome sourcerat gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX803751 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.16%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage63.75
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702553.
Description

Uncultivated genome recovered from an assembly of the SRX803751 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457625
ID:
6457625

BioProject SRA Nucleotide

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