Uncultivated Enterobacteriaceae bacterium UBA648 g... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN06457564; Sample name: Enterobacteriaceae bacterium UBA648; SRA: SRS2038532

Organism: Candidatus Pantoea superficialis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA648
isolation source	metal/plastic
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822124 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	96.16%
contamination_estimated	1.10%
environmental_sample	true
genome_coverage	33.53
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748712.
type-material	reference material of Pantoea superficialis