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Uncultivated Candidatus Saccharibacteria bacterium UBA1235 genome recovered from SRX035182

Identifiers
BioSample: SAMN06457550; Sample name: Candidatus Saccharibacteria bacterium UBA1235; SRA: SRS2031921
Organism
Candidatus Saccharibacteria bacterium UBA1235
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Saccharibacteria; unclassified Candidatus Saccharibacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1235
isolation sourceSwitch grass fiber attached community in cow rumen, 72 hour post incubation
metagenome sourcebovine gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX035182 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated74.33%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage24.98
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bovine gut metagenome reads: SRR094926,SRR094429,SRR094437.
Description

Uncultivated genome recovered from an assembly of the SRX035182 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457550
ID:
6457550

BioProject SRA Nucleotide

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