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Uncultivated Smithella sp. UBA4047 genome recovered from SRX211001

Identifiers
BioSample: SAMN06457342; Sample name: Smithella sp. UBA4047; SRA: SRS2032536
Organism
Smithella sp. UBA4047
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Syntrophia; Syntrophales; Smithellaceae; Smithella; unclassified Smithella
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Syncrude tailings pond, Wood Buffalo, Alberta
isolateUBA4047
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX211001 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.16%
contamination_estimated1.94%
environmental_sampletrue
genome_coverage607.42
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636597.
Description

Uncultivated genome recovered from an assembly of the SRX211001 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457342
ID:
6457342

BioProject SRA Nucleotide

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