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Uncultivated Achromobacter xylosoxidans UBA6748 genome recovered from SRX823180

Identifiers
BioSample: SAMN06457276; Sample name: Achromobacter xylosoxidans UBA6748; SRA: SRS2034666
Organism
Achromobacter xylosoxidans
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6748
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823180 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.50%
contamination_estimated0.93%
environmental_sampletrue
genome_coverage39.13
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749797.
Description

Uncultivated genome recovered from an assembly of the SRX823180 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457276
ID:
6457276

BioProject SRA Nucleotide

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