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Uncultivated Bifidobacterium sp. UBA6839 genome recovered from SRX834639

Identifiers
BioSample: SAMN06457263; Sample name: Bifidobacterium sp. UBA6839; SRA: SRS2035191
Organism
Bifidobacterium sp. UBA6839
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; unclassified Bifidobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA6839
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834639 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.79%
contamination_estimated0.45%
environmental_sampletrue
genome_coverage20.3
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747038.
Description

Uncultivated genome recovered from an assembly of the SRX834639 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457263
ID:
6457263

BioProject SRA Nucleotide

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