Uncultivated Pantoea sp. UBA4389 genome recovered ... - BioSample - NCBI

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Uncultivated Pantoea sp. UBA4389 genome recovered from SRX822755

Identifiers: BioSample: SAMN06457229; Sample name: Pantoea sp. UBA4389; SRA: SRS2039185

Organism: Pantoea sp. UBA4389
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; unclassified Pantoea

Package: Microbe; version 1.0

Attributes

collection date	not applicable
geographic location	USA:New York City
isolate	UBA4389
isolation source	metal
metagenome source	terrestrial metagenome
sample type	metagenomic assembly
subsource note	Genome binned from sequencing reads available in SRX822755 metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	99.18%
contamination_estimated	0.16%
environmental_sample	true
genome_coverage	33.3
mapping_method	BWA (BWA-MEM)
mapping_method_version	0.7.12-r1039
metagenomic	true
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6
value	This BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749372.

Description: Uncultivated genome recovered from an assembly of the SRX822755 metagenome.

BioProject: PRJNA348753 metagenomes
Retrieve all samples from this project

Submission: University of Queensland, Donovan Parks; 2017-02-27

Accession:: SAMN06457229
ID:: 6457229

BioProject SRA Nucleotide

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Uncultivated Pantoea sp. UBA4389 genome recovered from SRX822755
Uncultivated Pantoea sp. UBA4389 genome recovered from SRX822755

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