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Uncultivated Lentisphaeria bacterium UBA1407 genome recovered from ERX250271

Identifiers
BioSample: SAMN06457167; Sample name: Lentisphaeria bacterium UBA1407; SRA: SRS2030560
Organism
Lentisphaeria bacterium UBA1407
cellular organisms; Bacteria; Pseudomonadati; PVC group; Lentisphaerota; Lentisphaeria; unclassified Lentisphaeria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMalaysia
isolateUBA1407
isolation sourceclosed biodigester
metagenome sourcepalm oil mill effluent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX250271 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.46%
contamination_estimated2.06%
environmental_sampletrue
genome_coverage23.45
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
Description

Uncultivated genome recovered from an assembly of the ERX250271 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457167
ID:
6457167

BioProject SRA Nucleotide

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