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Uncultivated Epsilonproteobacteria bacterium UBA1340 genome recovered from SRX144201

Identifiers
BioSample: SAMN06457135; Sample name: Epsilonproteobacteria bacterium UBA1340; SRA: SRS2032295
Organism
Epsilonproteobacteria bacterium UBA1340
cellular organisms; Bacteria; Pseudomonadati; Campylobacterota; unclassified Campylobacterota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1340
isolation sourcebioreactor
metagenome sourcebioreactor metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX144201 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.72%
contamination_estimated0.54%
environmental_sampletrue
genome_coverage67.51
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR490747.
Description

Uncultivated genome recovered from an assembly of the SRX144201 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457135
ID:
6457135

BioProject SRA Nucleotide

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