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Uncultivated Stenotrophomonas maltophilia UBA2043 genome recovered from SRX822158

Identifiers
BioSample: SAMN06456966; Sample name: Stenotrophomonas maltophilia UBA2043; SRA: SRS2038550
Organism
Stenotrophomonas maltophilia
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia group
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA2043
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822158 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.66%
contamination_estimated0.20%
environmental_sampletrue
genome_coverage35.98
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748768.
Description

Uncultivated genome recovered from an assembly of the SRX822158 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456966
ID:
6456966

BioProject SRA Nucleotide

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