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Uncultivated Polynucleobacter sp. UBA962 genome recovered from SRX474032

Identifiers
BioSample: SAMN06456954; Sample name: Polynucleobacter sp. UBA962; SRA: SRS2033935
Organism
Polynucleobacter sp. UBA962
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter; unclassified Polynucleobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSpain: Alicante
isolateUBA962
isolation source0.22 micron fraction from Freshwater Reservoir Amadorio
metagenome sourcefreshwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX474032 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated76.10%
contamination_estimated1.93%
environmental_sampletrue
genome_coverage21.71
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR1173821.
Description

Uncultivated genome recovered from an assembly of the SRX474032 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456954
ID:
6456954

BioProject SRA Nucleotide

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