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Uncultivated Actinobacteria bacterium UBA2279 genome recovered from SRX559898

Identifiers
BioSample: SAMN06456530; Sample name: Actinobacteria bacterium UBA2279; SRA: SRS2034223
Organism
Actinobacteria bacterium UBA2279
cellular organisms; Bacteria; Bacillati; Actinomycetota; unclassified Actinomycetota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Northern Alberta
isolateUBA2279
isolation sourcebiofilm
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX559898 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.31%
contamination_estimated2.22%
environmental_sampletrue
genome_coverage82.59
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313259,SRR1313257,SRR1313264,SRR1313260,SRR1313258,SRR1313261.
Description

Uncultivated genome recovered from an assembly of the SRX559898 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456530
ID:
6456530

BioProject SRA Nucleotide

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