U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Proteobacteria bacterium UBA1844 genome recovered from SRX201528

Identifiers
BioSample: SAMN06456510; Sample name: Proteobacteria bacterium UBA1844; SRA: SRS2032378
Organism
Proteobacteria bacterium UBA1844
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1844
isolation sourceActivated sludge form a lab-scale nitrification reactor
metagenome sourcemetagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX201528 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.49%
contamination_estimated5.19%
environmental_sampletrue
genome_coverage27.29
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the metagenome reads: SRR609198.
Description

Uncultivated genome recovered from an assembly of the SRX201528 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456510
ID:
6456510

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center