U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Patescibacteria group bacterium UBA5624 genome recovered from SRX211342

Identifiers
BioSample: SAMN06456446; Sample name: Patescibacteria group bacterium UBA5624; SRA: SRS2032600
Organism
Patescibacteria group bacterium UBA5624
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; unclassified Patescibacteria group
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Syncrude, Ft. McMurray, Alberta
isolateUBA5624
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX211342 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated65.71%
contamination_estimated2.43%
environmental_sampletrue
genome_coverage19.62
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636569.
Description

Uncultivated genome recovered from an assembly of the SRX211342 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456446
ID:
6456446

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center