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Uncultivated Pseudomonas stutzeri UBA6639 genome recovered from SRX822267

Identifiers
BioSample: SAMN06456408; Sample name: Pseudomonas stutzeri UBA6639; SRA: SRS2038684
Organism
Stutzerimonas stutzeri
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6639
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822267 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.62%
contamination_estimated0.14%
environmental_sampletrue
genome_coverage56.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748884.
Description

Uncultivated genome recovered from an assembly of the SRX822267 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456408
ID:
6456408

BioProject SRA Nucleotide

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