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Uncultivated Flavobacteriaceae bacterium UBA1978 genome recovered from ERX555916

Identifiers
BioSample: SAMN06456320; Sample name: Flavobacteriaceae bacterium UBA1978; SRA: SRS2031125
Organism
Flavobacteriaceae bacterium UBA1978
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; unclassified Flavobacteriaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1978
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555916 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated70.99%
contamination_estimated2.94%
environmental_sampletrue
genome_coverage42.37
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599163.
Description

Uncultivated genome recovered from an assembly of the ERX555916 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456320
ID:
6456320

BioProject SRA Nucleotide

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