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Uncultivated Akkermansiaceae bacterium UBA1955 genome recovered from ERX555919

Identifiers
BioSample: SAMN06456077; Sample name: Akkermansiaceae bacterium UBA1955; SRA: SRS2031140
Organism
Akkermansiaceae bacterium UBA1955
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Verrucomicrobiia; Verrucomicrobiales; Akkermansiaceae; unclassified Akkermansiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1955
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555919 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated83.49%
contamination_estimated0.68%
environmental_sampletrue
genome_coverage18.39
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR598954.
Description

Uncultivated genome recovered from an assembly of the ERX555919 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456077
ID:
6456077

BioProject SRA Nucleotide

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