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Uncultivated Proteiniphilum sp. UBA5431 genome recovered from SRX691281

Identifiers
BioSample: SAMN06456064; Sample name: Proteiniphilum sp. UBA5431; SRA: SRS2035945
Organism
Proteiniphilum sp. UBA5431
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Proteiniphilum; unclassified Proteiniphilum
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Chengdu
isolateUBA5431
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691281 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.50%
contamination_estimated0.55%
environmental_sampletrue
genome_coverage86.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562006.
Description

Uncultivated genome recovered from an assembly of the SRX691281 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456064
ID:
6456064

BioProject SRA Nucleotide

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