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Uncultivated Neorhizobium sp. UBA3142 genome recovered from SRX823353

Identifiers
BioSample: SAMN06455956; Sample name: Neorhizobium sp. UBA3142; SRA: SRS2034848
Organism
Neorhizobium sp. UBA3142
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium; unclassified Neorhizobium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3142
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823353 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.67%
contamination_estimated0.21%
environmental_sampletrue
genome_coverage31.94
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749970.
Description

Uncultivated genome recovered from an assembly of the SRX823353 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455956
ID:
6455956

BioProject SRA Nucleotide

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