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Uncultivated Firmicutes bacterium UBA3575 genome recovered from SRX742691

Identifiers
BioSample: SAMN06455820; Sample name: Firmicutes bacterium UBA3575; SRA: SRS2036246
Organism
Firmicutes bacterium UBA3575
cellular organisms; Bacteria; Bacillati; Bacillota; unclassified Bacillota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationPacific Ocean
isolateUBA3575
isolation sourcesediment
metagenome sourcemarine sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX742691 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.54%
contamination_estimated2.97%
environmental_sampletrue
genome_coverage51.43
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine sediment metagenome reads: SRR1628696.
Description

Uncultivated genome recovered from an assembly of the SRX742691 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455820
ID:
6455820

BioProject SRA Nucleotide

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