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Uncultivated Sphingomonadales bacterium UBA1936 genome recovered from SRX247688

Identifiers
BioSample: SAMN06455795; Sample name: Sphingomonadales bacterium UBA1936; SRA: SRS2032654
Organism
Sphingomonadales bacterium UBA1936
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; unclassified Sphingomonadales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationDenmark: Ejby Moelle, Odense
isolateUBA1936
isolation sourcewastewater
metagenome sourcewastewater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX247688 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.64%
contamination_estimated1.21%
environmental_sampletrue
genome_coverage208.34
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR770574,SRR770019.
Description

Uncultivated genome recovered from an assembly of the SRX247688 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455795
ID:
6455795

BioProject Nucleotide

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