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Uncultivated Syntrophaceae bacterium UBA1062 genome recovered from SRX371701

Identifiers
BioSample: SAMN06455729; Sample name: Syntrophaceae bacterium UBA1062; SRA: SRS2033719
Organism
Syntrophaceae bacterium UBA1062
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Syntrophia; Syntrophales; Syntrophaceae; unclassified Syntrophaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1062
isolation sourceAnaerobic Digestion Sludge
metagenome sourceanaerobic digester metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX371701 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated86.90%
contamination_estimated2.10%
environmental_sampletrue
genome_coverage43.47
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome reads: SRR1022352.
Description

Uncultivated genome recovered from an assembly of the SRX371701 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455729
ID:
6455729

BioProject SRA Nucleotide

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