U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Nitrospira sp. UBA6488 genome recovered from ERX633342

Identifiers
BioSample: SAMN06455726; Sample name: Nitrospira sp. UBA6488; SRA: SRS2031762
Organism
Nitrospira sp. UBA6488
cellular organisms; Bacteria; Pseudomonadati; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; Nitrospira; unclassified Nitrospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA6488
isolation sourceLogan River
metagenome sourceLogan River metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX633342 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated82.23%
contamination_estimated1.82%
environmental_sampletrue
genome_coverage14.42
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Logan River metagenome reads: ERR688341.
Description

Uncultivated genome recovered from an assembly of the ERX633342 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455726
ID:
6455726

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center