U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Glaciecola sp. UBA1851 genome recovered from ERX288947

Identifiers
BioSample: SAMN06455694; Sample name: Glaciecola sp. UBA1851; SRA: SRS2030570
Organism
Glaciecola sp. UBA1851
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola; unclassified Glaciecola
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1851
isolation sourceTara Oceans DNA samples corresponding to size fractions for protist
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX288947 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.22%
contamination_estimated3.42%
environmental_sampletrue
genome_coverage15.31
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR315802.
Description

Uncultivated genome recovered from an assembly of the ERX288947 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455694
ID:
6455694

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center