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Uncultivated Staphylococcus saprophyticus UBA4192 genome recovered from SRX823468

Identifiers
BioSample: SAMN06455647; Sample name: Staphylococcus saprophyticus UBA4192; SRA: SRS2034923
Organism
Staphylococcus saprophyticus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4192
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823468 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.33%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage366.38
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1750086.
Description

Uncultivated genome recovered from an assembly of the SRX823468 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455647
ID:
6455647

BioProject SRA Nucleotide

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