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Uncultivated Proteiniphilum sp. UBA4993 genome recovered from SRX691278

Identifiers
BioSample: SAMN06455638; Sample name: Proteiniphilum sp. UBA4993; SRA: SRS2035886
Organism
Proteiniphilum sp. UBA4993
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Proteiniphilum; unclassified Proteiniphilum
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA4993
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691278 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated86.34%
contamination_estimated1.09%
environmental_sampletrue
genome_coverage25.39
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562003.
Description

Uncultivated genome recovered from an assembly of the SRX691278 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455638
ID:
6455638

BioProject SRA Nucleotide

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